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INDEXED
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IGVFFI9493TGFB
IGVFFI9493TGFB
released
validated
Json view
File Set
IGVFDS3441CZQC
(single-nucleus ATAC-seq (10x multiome))
Summary
seqspec of IGVFFI0643WRFX, IGVFFI0197YGQK, IGVFFI3928HUMA, IGVFFI7328QVDN
File Format
yaml
Content Type
seqspec
Aliases
chongyuan-luo:ys3b_snATAC_L2_seqspec
md5sum
b48da5cb8304592a004d7986cd9f3ede
Content MD5sum
15b0596dcd30f369abe3af05c2206787
File Size
1.3 KB
Submitted File Name
/home/ec2-user/igvf/submit/yaml/year2/multiome/atac/ys3b.L2.yaml.gz
Checkfiles Version
v20
Attribution
Kathrin Plath, UCLA
(
HG012079
—
Chongyuan Luo
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0197YGQK
fastq
reads
1
Read 1
Illumina NovaSeq 6000
2
14 GB
Kathrin Plath, UCLA
validated
IGVFFI0643WRFX
fastq
reads
1
Read 1
Illumina NovaSeq 6000
2
2.0 GB
Kathrin Plath, UCLA
validated
IGVFFI3928HUMA
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
2
4.5 GB
Kathrin Plath, UCLA
validated
IGVFFI7328QVDN
fastq
reads
1
Read 2
Illumina NovaSeq 6000
2
15 GB
Kathrin Plath, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8294LIUF
MultiplexedSample
fibroblast
multiplexed sample: Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day; Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 7 days; ... and 2 more samples