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IGVFFI9471PHWP

released
validated
File Set
IGVFDS5177YHMM(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI6997HAKK, IGVFFI4139IHFB
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_3808_seqspec
md5sum
e90675b7876bc63cbe88b4f3b0053577
Content MD5sum
4635caebb54e1c4d9d5acf2c79d86ca7
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_3808_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
3808
Read 2, Barcode index
H22KKDRX5
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
3808
Read 1
H22KKDRX5
728 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)

Files Derived From This File

2 items
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
6.8 GB
validated
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
1.2 GB
validated