IGVFFI9435UFOD

released
validated
{
    "@context": "/terms/",
    "@id": "/configuration-files/IGVFFI9435UFOD/",
    "@type": [
        "ConfigurationFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI9435UFOD",
    "aliases": [
        "buenrostro-bernstein:SS-LS_174_seqspec"
    ],
    "assay_titles": [
        "SHARE-seq"
    ],
    "audit": {},
    "award": {
        "@id": "/awards/HG011986/",
        "component": "mapping"
    },
    "content_md5sum": "bfc82c3e5ccae8a73d05f37fe1ca29e4",
    "content_type": "seqspec",
    "creation_timestamp": "2024-11-21T19:14:23.369724+00:00",
    "file_format": "yaml",
    "file_set": {
        "@id": "/measurement-sets/IGVFDS2721AQQO/",
        "accession": "IGVFDS2721AQQO",
        "file_set_type": "experimental data",
        "samples": [
            {
                "@id": "/primary-cells/IGVFSM2223HAHK/",
                "accession": "IGVFSM2223HAHK",
                "classifications": [
                    "primary cell"
                ],
                "sample_terms": [
                    {
                        "@id": "/sample-terms/UBERON_0002371/",
                        "status": "released",
                        "term_name": "bone marrow"
                    }
                ],
                "status": "released",
                "summary": "bone marrow cell (cellular sub pool: SS-PKR 212), Homo sapiens",
                "taxa": "Homo sapiens"
            }
        ],
        "status": "released",
        "summary": "single-cell ATAC-seq (SHARE-seq)"
    },
    "file_size": 1207,
    "gene_list_for": [],
    "href": "/configuration-files/IGVFFI9435UFOD/@@download/IGVFFI9435UFOD.yaml.gz",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jason-buenrostro/",
        "title": "Jason Buenrostro, Broad"
    },
    "loci_list_for": [],
    "md5sum": "c53b74d049928cec328417334498570f",
    "release_timestamp": "2025-01-23T18:02:35.130958+00:00",
    "s3_uri": "s3://igvf-files/2024/11/21/fd7d5b30-468c-4ac0-8606-9967323fdb35/IGVFFI9435UFOD.yaml.gz",
    "schema_version": "7",
    "seqspec_of": [
        "/sequence-files/IGVFFI8305JJZD/",
        "/sequence-files/IGVFFI1456HVZR/"
    ],
    "status": "released",
    "submitted_by": {
        "@id": "/users/c0838247-5022-46cf-a8fa-426e73bf4c94/",
        "title": "Siddarth Wekhande"
    },
    "submitted_file_name": "/Users/swekhand/Documents/GitHub/epi-sw-IGVF-submission/submissions/seqspecs/sai-single-donor-atac-upgraded/SS-LS_174_seqspec.yaml.gz",
    "summary": "seqspec of IGVFFI8305JJZD, IGVFFI1456HVZR",
    "upload_status": "validated",
    "uuid": "fd7d5b30-468c-4ac0-8606-9967323fdb35"
}