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INDEXED
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ConfigurationFile
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IGVFFI9403AUFV
IGVFFI9403AUFV
released
validated
Json view
File Set
IGVFDS2623QODS
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI5859SOOF, IGVFFI3335AQLU, IGVFFI7711ZJTT, IGVFFI8681HIWH
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp15_rna_10x1_NGS1
md5sum
2d3662145776df9f24951d6c2fcf2cf0
Content MD5sum
dc50f8925a5ab6ceb738825912e1d106
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec_new/igvf_exp15_rna_10x1_NGS1_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG011972
—
Jesse Engreitz
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3335AQLU
fastq
reads
1
Read 2
Illumina NovaSeq X
22NCFCLT3
1
18 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5859SOOF
fastq
reads
1
Read 1
Illumina NovaSeq X
22NCFCLT3
1
8.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7711ZJTT
fastq
reads
1
Illumina NovaSeq X
22NCFCLT3
1
2.2 GB
Ansuman Satpathy, Stanford
validated
IGVFFI8681HIWH
fastq
reads
1
Illumina NovaSeq X
22NCFCLT3
1
2.2 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM2174QALS
MultiplexedSample
GM25256 (WTC-11)
multiplexed sample: Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to liver for 18 days; Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to liver for 13 days; ... and 10 more samples