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INDEXED
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ConfigurationFile
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IGVFFI9359NIZY
IGVFFI9359NIZY
released
validated
Json view
File Set
IGVFDS9953SGYZ
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI4122WAAX, IGVFFI5409LZYW, IGVFFI2538PKOB
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_3906_seqspec
md5sum
36b969ad4167d15adeae90515fc043c5
Content MD5sum
c5eeaeacddbff014393fad7efeb1ca7f
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI4122WAAX_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2538PKOB
fastq
reads
3906
Barcode index
Illumina NovaSeq X
22523KLT3
1.0 GB
Jason Buenrostro, Broad
validated
IGVFFI4122WAAX
fastq
reads
3906
Read 1
Illumina NovaSeq X
22523KLT3
2.5 GB
Jason Buenrostro, Broad
validated
IGVFFI5409LZYW
fastq
reads
3906
Read 2
Illumina NovaSeq X
22523KLT3
1.2 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1399KNRB
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 177)