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INDEXED
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ConfigurationFile
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IGVFFI9292BDUE
IGVFFI9292BDUE
released
validated
Json view
File Set
IGVFDS6690HJKJ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI2146FIOR, IGVFFI4317LNJC, IGVFFI4743YZYA
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI4317LNJC_seqspec
md5sum
6d4d0bad0766b343d9a21dbb2e0c6908
Content MD5sum
a9c1530945faff95fe7264527e2b2ddb
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI4317LNJC_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2146FIOR
fastq
reads
2
Read 2
Illumina NovaSeq 6000
1.9 GB
Jason Buenrostro, Broad
validated
IGVFFI4317LNJC
fastq
reads
2
Read 1
Illumina NovaSeq 6000
1.8 GB
Jason Buenrostro, Broad
validated
IGVFFI4743YZYA
fastq
reads
2
Barcode index
Illumina NovaSeq 6000
1.3 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0354RWOF
PrimaryCell
colon
Mus musculus C57BL/6J colon cell