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INDEXED
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IGVFFI9174SILI
IGVFFI9174SILI
released
validated
Json view
File Set
IGVFDS6282JZAK
(single-nucleus ATAC-seq (10x multiome))
Summary
seqspec of IGVFFI1893JOJB, IGVFFI7181YDRH, IGVFFI9624KANK, IGVFFI0023OOAD
File Format
yaml
Content Type
seqspec
Aliases
chongyuan-luo:ys3c_snATAC_L2_seqspec
md5sum
ca33a2aa897bfa4e2b888b291f65c074
Content MD5sum
85e9c8d811b37169f5f0b8e4ee51dedf
File Size
1.3 KB
Submitted File Name
/home/ec2-user/igvf/submit/yaml/year2/multiome/atac/ys3c.L2.yaml.gz
Checkfiles Version
v20
Attribution
Kathrin Plath, UCLA
(
HG012079
—
Chongyuan Luo
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0023OOAD
fastq
reads
1
Read 2
Illumina NovaSeq 6000
2
14 GB
Kathrin Plath, UCLA
validated
IGVFFI1893JOJB
fastq
reads
1
Read 1
Illumina NovaSeq 6000
2
1.8 GB
Kathrin Plath, UCLA
validated
IGVFFI7181YDRH
fastq
reads
1
Read 1
Illumina NovaSeq 6000
2
14 GB
Kathrin Plath, UCLA
validated
IGVFFI9624KANK
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
2
4.4 GB
Kathrin Plath, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1173KPTS
MultiplexedSample
fibroblast
multiplexed sample: Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day; Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 5 days; ... and 2 more samples