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INDEXED
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ConfigurationFile
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IGVFFI9086WGIT
IGVFFI9086WGIT
released
validated
Json view
File Set
IGVFDS0020LQRY
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI1847DJVR, IGVFFI0003RJLQ
File Format
yaml
Content Type
seqspec
Aliases
bradley-bernstein:SS-LS_2003_seqspec
md5sum
fecd354efde6a22a9446fcfbd524e0e0
Content MD5sum
6f3cfe4a6661af139613590ec008e474
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_2003_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0003RJLQ
fastq
reads
41
Read 2, Barcode index
Illumina NovaSeq 6000
1.2 GB
Jason Buenrostro, Broad
validated
IGVFFI1847DJVR
fastq
reads
41
Read 1
Illumina NovaSeq 6000
641 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3932SXVT
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)