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INDEXED
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ConfigurationFile
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IGVFFI9026GHLA
IGVFFI9026GHLA
released
validated
Json view
File Set
IGVFDS3638UVNV
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI5944WRFT, IGVFFI9706EHIQ
File Format
yaml
Content Type
seqspec
Aliases
bradley-bernstein:SS-LS_2001_seqspec
md5sum
9c950c10e8b23db58a84a5304304ff0a
Content MD5sum
9c0a688df013dec972da0094d3de0d8a
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_2001_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI5944WRFT
fastq
reads
43
Read 1
Illumina NovaSeq 6000
232 MB
Jason Buenrostro, Broad
validated
IGVFFI9706EHIQ
fastq
reads
43
Read 2, Barcode index
Illumina NovaSeq 6000
412 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3932SXVT
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)