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INDEXED
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IGVFFI9024YJBE
IGVFFI9024YJBE
released
validated
Json view
File Set
IGVFDS1085SCZI
(single-nucleus ATAC-seq (10x multiome))
Summary
seqspec of IGVFFI5706AEPS, IGVFFI1771YVVX, IGVFFI5559EVYB, IGVFFI1992CETB
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_mouse_bridge_115_atac
md5sum
c55d3383acf0d3cfc002c3a682ae4348
Content MD5sum
487eb6b528e46d88b0d3ddcbb4fe8d7d
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_mouse_bridge_115_atac_atac_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1771YVVX
fastq
reads
1
Read 2
Illumina NovaSeq 6000
HV7LKDSX5
1
18 GB
Ansuman Satpathy, Stanford
validated
IGVFFI1992CETB
fastq
reads
1
Illumina NovaSeq 6000
HV7LKDSX5
1
2.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5559EVYB
fastq
reads
1
Read 1
Illumina NovaSeq 6000
HV7LKDSX5
1
17 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5706AEPS
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
HV7LKDSX5
1
5.7 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9817DJBX
Tissue
left cerebral cortex
left cerebral cortex tissue, male, Mus musculus C57BL/6J (10 weeks)
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford