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IGVFFI9001SPLR

released
validated
File Set
IGVFDS4653HFNR(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI3934VSKO, IGVFFI9203FDKY
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_7334_seqspec
md5sum
020b9dcb7516eb077ad6e83950f8b119
Content MD5sum
3ff6c05d2d4b6e1abb046f424f6011cf
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_7334_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
7334
Read 1
22KFF5LT3
8.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
7334
Read 2, Barcode index
22KFF5LT3
13 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)

Files Derived From This File

2 items
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
1.7 GB
validated
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
23 GB
validated