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INDEXED
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ConfigurationFile
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IGVFFI9001SPLR
IGVFFI9001SPLR
released
validated
Json view
File Set
IGVFDS4653HFNR
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI3934VSKO, IGVFFI9203FDKY
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_7334_seqspec
md5sum
020b9dcb7516eb077ad6e83950f8b119
Content MD5sum
3ff6c05d2d4b6e1abb046f424f6011cf
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_7334_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3934VSKO
fastq
reads
7334
Read 1
Illumina NovaSeq 6000
22KFF5LT3
8.9 GB
Jason Buenrostro, Broad
validated
IGVFFI9203FDKY
fastq
reads
7334
Read 2, Barcode index
Illumina NovaSeq 6000
22KFF5LT3
13 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)