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IGVFFI8973WHQA

released
validated
File Set
IGVFDS9295POCI(lipid-conjugated oligo sequencing for interference single-nucleus ATAC-seq (10x multiome with MULTI-seq), interference single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI8633CYXB, IGVFFI1030BVRK, IGVFFI4769MROL, IGVFFI8481VUXS
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp10_multi_10x1_NGS2
md5sum
ab7223a8f0e3b8c620c246b094df0637
Content MD5sum
fd11ecb199026dbf11031fb6a530d7c4
File Size
1.3 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp10_multi_10x1_NGS2_multi_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford

seqspec File Of

4 items
Read Names
fastq
reads
1
223JHYLT3
5
199 MB
Ansuman Satpathy, Stanford
validated
fastq
reads
1
223JHYLT3
5
246 MB
Ansuman Satpathy, Stanford
validated
fastq
reads
1
223JHYLT3
5
656 MB
Ansuman Satpathy, Stanford
validated
fastq
reads
1
223JHYLT3
5
1.5 GB
Ansuman Satpathy, Stanford
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) Jurkat cell line treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; Homo sapiens (female) K562 cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples