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ConfigurationFile
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IGVFFI8961FBCR
IGVFFI8961FBCR
released
validated
Json view
File Set
IGVFDS3349HKDV
(lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI3377NMCB, IGVFFI4126OMOI, IGVFFI2418UVCP, IGVFFI3222PGNX
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp6_multi_10x1_NGS3
md5sum
bf0d70514c50dcda9357e4f4ccc53222
Content MD5sum
97c5180b2294db01b52e248b520e57c6
File Size
1.3 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp6_multi_10x1_NGS3_multi_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2418UVCP
fastq
reads
1
Illumina NovaSeq X
223JHMLT3
3
1.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI3222PGNX
fastq
reads
1
Illumina NovaSeq X
223JHMLT3
3
458 MB
Ansuman Satpathy, Stanford
validated
IGVFFI3377NMCB
fastq
reads
1
Illumina NovaSeq X
223JHMLT3
3
171 MB
Ansuman Satpathy, Stanford
validated
IGVFFI4126OMOI
fastq
reads
1
Illumina NovaSeq X
223JHMLT3
3
125 MB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9282FATG
MultiplexedSample
H1-hESC
multiplexed sample: H1-hESC differentiated cell specimen induced to islet of Langerhans for 18 days, male, Homo sapiens; H1-hESC differentiated cell specimen induced to islet of Langerhans for 7 days, male, Homo sapiens; ... and 6 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford