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INDEXED
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ConfigurationFile
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IGVFFI8866BBVY
IGVFFI8866BBVY
released
validated
Json view
File Set
IGVFDS8461GQKB
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI5492MULS, IGVFFI0452CQTC, IGVFFI2940WUXZ
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_4356_seqspec
md5sum
c1c39d84fa75533129aabbc87a431ed7
Content MD5sum
1adcebc8d2cdb8b30d090ffb8c8e3168
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI5492MULS_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0452CQTC
fastq
reads
4356
Read 2
Illumina NovaSeq 6000
H75F7DSX5
1.3 GB
Jason Buenrostro, Broad
validated
IGVFFI2940WUXZ
fastq
reads
4356
Barcode index
Illumina NovaSeq 6000
H75F7DSX5
1.2 GB
Jason Buenrostro, Broad
validated
IGVFFI5492MULS
fastq
reads
4356
Read 1
Illumina NovaSeq 6000
H75F7DSX5
3.1 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9034PZJY
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 170)