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INDEXED
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ConfigurationFile
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IGVFFI8788BZVI
IGVFFI8788BZVI
released
validated
Json view
File Set
IGVFDS9953SGYZ
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI2810PSYU, IGVFFI0477ZRDQ, IGVFFI6022EUNG
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8935_seqspec
md5sum
3b596f3240603a09e37209de6dac667f
Content MD5sum
2a8330ba601e7a42bed3af4880fbd2bb
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI2810PSYU_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0477ZRDQ
fastq
reads
8935
Read 2
Illumina NovaSeq X
22LMVNLT4
2.0 GB
Jason Buenrostro, Broad
validated
IGVFFI2810PSYU
fastq
reads
8935
Read 1
Illumina NovaSeq X
22LMVNLT4
2.1 GB
Jason Buenrostro, Broad
validated
IGVFFI6022EUNG
fastq
reads
8935
Barcode index
Illumina NovaSeq X
22LMVNLT4
1.2 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1399KNRB
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 177)