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INDEXED
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ConfigurationFile
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IGVFFI8780JHZV
IGVFFI8780JHZV
released
validated
Json view
File Set
IGVFDS9728TWXO
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI4498HQPP, IGVFFI1728ECQN
File Format
yaml
Content Type
seqspec
Aliases
bradley-bernstein:SS-LS_2102_seqspec
md5sum
192597a9442cfbcdf75f4ef79e940d42
Content MD5sum
59fcd3a8532ad2054dc0c739aaedce71
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_2102_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1728ECQN
fastq
reads
263
Read 2, Barcode index
Illumina NovaSeq 6000
362 MB
Jason Buenrostro, Broad
validated
IGVFFI4498HQPP
fastq
reads
263
Read 1
Illumina NovaSeq 6000
208 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8883WYCA
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)