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IGVFFI8780GOTT

released
validated
File Set
IGVFDS8535JZRF(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI4748IHHC, IGVFFI3275ZYCM
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_1979_seqspec
md5sum
34d17c4a8d48d722c67bec4d7d73925d
Content MD5sum
d1b0e6a707f2a058922f955329517211
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_1979_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
65
Read 2, Barcode index
725 MB
Jason Buenrostro, Broad
validated
fastq
reads
65
Read 1
407 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
367 MB
validated
tar
comprehensive gene count matrix
unfiltered cell by gene in comprehensive gene count matrix
Jason Buenrostro, Broad
2.2 GB
validated