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INDEXED
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ConfigurationFile
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IGVFFI8780GOTT
IGVFFI8780GOTT
released
validated
Json view
File Set
IGVFDS8535JZRF
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI4748IHHC, IGVFFI3275ZYCM
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_1979_seqspec
md5sum
34d17c4a8d48d722c67bec4d7d73925d
Content MD5sum
d1b0e6a707f2a058922f955329517211
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_1979_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3275ZYCM
fastq
reads
65
Read 2, Barcode index
Illumina NovaSeq 6000
725 MB
Jason Buenrostro, Broad
validated
IGVFFI4748IHHC
fastq
reads
65
Read 1
Illumina NovaSeq 6000
407 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3932SXVT
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)