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IGVFFI8748TCQB

released
validated
File Set
IGVFDS8535CXVX(scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)
Summary
seqspec of IGVFFI9942XRES, IGVFFI0180MAUH, IGVFFI8003IBBB
File Format
yaml
Content Type
seqspec
Aliases
jay-shendure:CRISPRa_singlecell_K562_VP64_10Xlane2_seqlane2_exprs_seqspec
md5sum
09cf2ac0f6d8ef01cb7e5b9ce35befa9
Content MD5sum
bd08c1cf333e4fbf3553d1ed4b0fc597
File Size
1.3 KB
Submitted File Name
/net/shendure/vol1/home/martin91/IGVF/forupload/seqspecs/CRISPRa/CRISPRa_IGVFDS8535CXVX_2_exprs_seqspec_v3.yaml.gz
Checkfiles Version
v20
Attribution
Jay Shendure, UW

seqspec File Of

3 items
Read Names
fastq
reads
1
Read 1
AAAHG2HHV
2
2.3 GB
Jay Shendure, UW
validated
fastq
reads
1
Read 2
AAAHG2HHV
2
5.0 GB
Jay Shendure, UW
validated
fastq
reads
1
AAAHG2HHV
2
740 MB
Jay Shendure, UW
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) K562 cell line (cellular sub pool: 10Xlane2) modified with CRISPRa Sp-dCas9-VP64, transfected with a guide library