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IGVFFI8746NBNF

released
validated
File Set
IGVFDS1592MBRQ(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI7373BZSM, IGVFFI2143XBQS
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5377_seqspec
md5sum
32a4a6c645a5a796b6d3902bf8ebf729
Content MD5sum
9115527051067c3ed9cc46d3b44ee5f5
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5377_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
5377
Read 2, Barcode index
22KHF5LT3
12 GB
Jason Buenrostro, Broad
validated
fastq
reads
5377
Read 1
22KHF5LT3
7.2 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 435)

Files Derived From This File

2 items
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
6.1 GB
validated
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
951 MB
validated