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INDEXED
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ConfigurationFile
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IGVFFI8647XLGU
IGVFFI8647XLGU
released
validated
Json view
File Set
IGVFDS6781RGTM
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI4277WVPZ, IGVFFI5802FITO
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8394_seqspec
md5sum
2470fba9ebf9dfef71e8e73a72a6f7ca
Content MD5sum
084817ae4e877a24631eb98448908e35
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8394_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI4277WVPZ
fastq
reads
8394
Read 1
Illumina NovaSeq X
22V3MJLT3
4.2 GB
Jason Buenrostro, Broad
validated
IGVFFI5802FITO
fastq
reads
8394
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
5.8 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6880XEAH
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 604)