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ConfigurationFile
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IGVFFI8555MEQZ
IGVFFI8555MEQZ
released
validated
Json view
File Set
IGVFDS0457UBHV
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI0386GCPN, IGVFFI1899EEOI, IGVFFI0881DUWD
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_4328_seqspec
md5sum
77793c1e3081731d8b16c13079bc0e37
Content MD5sum
20b5d44c605f6c44a17b25436d728792
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI0386GCPN_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0386GCPN
fastq
reads
4328
Read 1
Illumina NovaSeq 6000
H75F7DSX5
1.3 GB
Jason Buenrostro, Broad
validated
IGVFFI0881DUWD
fastq
reads
4328
Barcode index
Illumina NovaSeq 6000
H75F7DSX5
476 MB
Jason Buenrostro, Broad
validated
IGVFFI1899EEOI
fastq
reads
4328
Read 2
Illumina NovaSeq 6000
H75F7DSX5
597 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7511YRMC
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 208)