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INDEXED
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ConfigurationFile
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IGVFFI8496ATXD
IGVFFI8496ATXD
released
validated
Json view
File Set
IGVFDS9040WICU
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI6964MSYU, IGVFFI0208AMKP
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8377_seqspec
md5sum
09cf05b5cdb78314db121b1aaf00e425
Content MD5sum
41a9364207bcd8a0fc592c0b27263d10
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8377_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0208AMKP
fastq
reads
8377
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
4.3 GB
Jason Buenrostro, Broad
validated
IGVFFI6964MSYU
fastq
reads
8377
Read 1
Illumina NovaSeq X
22V3MJLT3
3.1 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9869JVFX
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 607)