Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Resources
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI8463MIZD
IGVFFI8463MIZD
released
validated
Json view
File Set
IGVFDS1219HABJ
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI4657JFOO, IGVFFI0039RGGG, IGVFFI2387YHIB, IGVFFI1384FKPJ
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp12_rna_10x2_NGS2
md5sum
e50b99c75f8b2e99c993901c3fb3c8f9
Content MD5sum
1fd2cc630e11fe7a9ec6ad0d185eed43
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp12_rna_10x2_NGS2_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0039RGGG
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
2
1.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI1384FKPJ
fastq
reads
1
Read 2
Illumina NovaSeq X
225LWLLT3
2
9.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI2387YHIB
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
2
1.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI4657JFOO
fastq
reads
1
Read 1
Illumina NovaSeq X
225LWLLT3
2
4.3 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM5189FTFS
MultiplexedSample
B cell
,
bone marrow
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford