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INDEXED
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IGVFFI8407OHTE
IGVFFI8407OHTE
released
validated
Json view
File Set
IGVFDS0255ZBJH
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI0961MKPO, IGVFFI4332PNYO, IGVFFI2679BDOS
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI4332PNYO_seqspec
md5sum
7e5ead083cba393b55fe3d125eeed2b3
Content MD5sum
b7a115223ab8c6df029c60f53bc12263
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI4332PNYO_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0961MKPO
fastq
reads
1
Read 2
Illumina NovaSeq 6000
16 GB
Jason Buenrostro, Broad
validated
IGVFFI2679BDOS
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
10 GB
Jason Buenrostro, Broad
validated
IGVFFI4332PNYO
fastq
reads
1
Read 1
Illumina NovaSeq 6000
16 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4239FRER
InVitroSystem
colonic epithelium
Mus musculus C57BL/6J colonic epithelium organoid induced to colon for 27 days