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INDEXED
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IGVFFI8367SBPF
IGVFFI8367SBPF
released
validated
Json view
File Set
IGVFDS1581RZTR
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI2045FCAR, IGVFFI4454IRLW, IGVFFI5940DPTW, IGVFFI0407HHEF
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp12_rna_10x6_NGS6
md5sum
27285f39e3dba1f06957ed2f95c81637
Content MD5sum
e4da43c217e78ae0c9f16e32c19757b2
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp12_rna_10x6_NGS6_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0407HHEF
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
6
846 MB
Ansuman Satpathy, Stanford
validated
IGVFFI2045FCAR
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
6
876 MB
Ansuman Satpathy, Stanford
validated
IGVFFI4454IRLW
fastq
reads
1
Read 1
Illumina NovaSeq X
225LWLLT3
6
3.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5940DPTW
fastq
reads
1
Read 2
Illumina NovaSeq X
225LWLLT3
6
7.2 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM5574TAPU
MultiplexedSample
B cell
,
bone marrow
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford