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INDEXED
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ConfigurationFile
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IGVFFI8342ZLTL
IGVFFI8342ZLTL
released
validated
Json view
File Set
IGVFDS7207IORB
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI0089JXZC, IGVFFI6483HCFF, IGVFFI5008FPTJ, IGVFFI5220EJPW
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp17_rna_10x2_NGS1
md5sum
3468e79ef0cb05aaa9c5fef5cd97a4d9
Content MD5sum
4ab7af384a621a2f77887079f9ee5249
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec_new/igvf_exp17_rna_10x2_NGS1_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG011972
—
Jesse Engreitz
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0089JXZC
fastq
reads
1
Read 1
Illumina NovaSeq X
22NCYLLT3
5
5.1 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5008FPTJ
fastq
reads
1
Illumina NovaSeq X
22NCYLLT3
5
1.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5220EJPW
fastq
reads
1
Illumina NovaSeq X
22NCYLLT3
5
1.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6483HCFF
fastq
reads
1
Read 2
Illumina NovaSeq X
22NCYLLT3
5
11 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM0198VBOA
MultiplexedSample
RUES2
multiplexed sample: Homo sapiens (female) RUES2 differentiated cell specimen induced to gastrula for 2 days; Homo sapiens (female) RUES2 differentiated cell specimen induced to gastrula for 1 day; ... and 10 more samples