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INDEXED
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IGVFFI8191TUUE
IGVFFI8191TUUE
released
validated
Json view
File Set
IGVFDS2361VFLK
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI2004TVUT, IGVFFI9715INOK, IGVFFI1746ZEVB, IGVFFI5740STMU
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp12_rna_10x4_NGS1
md5sum
c0f3b79d87c7765871fb6214c6bee5ba
Content MD5sum
8daf9f3e016edbb9b20023f5edf3a1fc
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp12_rna_10x4_NGS1_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1746ZEVB
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
1
912 MB
Ansuman Satpathy, Stanford
validated
IGVFFI2004TVUT
fastq
reads
1
Read 2
Illumina NovaSeq X
225LWLLT3
1
7.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5740STMU
fastq
reads
1
Read 1
Illumina NovaSeq X
225LWLLT3
1
3.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI9715INOK
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
1
930 MB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM3762JDVU
MultiplexedSample
B cell
,
bone marrow
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford