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INDEXED
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IGVFFI8155PXJB
IGVFFI8155PXJB
released
validated
Json view
File Set
IGVFDS0096YSHI
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI2396JTQY, IGVFFI5747APCQ, IGVFFI4119MQCD
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_4359_seqspec
md5sum
ee5e850f0013c2610c3ed4dc08c58058
Content MD5sum
57f49888a7aa7b2abac973fb27b1cec3
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI2396JTQY_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2396JTQY
fastq
reads
4359
Read 1
Illumina NovaSeq 6000
H75F7DSX5
3.4 GB
Jason Buenrostro, Broad
validated
IGVFFI4119MQCD
fastq
reads
4359
Barcode index
Illumina NovaSeq 6000
H75F7DSX5
1.2 GB
Jason Buenrostro, Broad
validated
IGVFFI5747APCQ
fastq
reads
4359
Read 2
Illumina NovaSeq 6000
H75F7DSX5
1.5 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3336NBXR
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 176)