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IGVFFI8153CPRN

released
validated
File Set
IGVFDS6909NSFT(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI4704XUQF, IGVFFI5683TTVW
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_7338_seqspec
md5sum
ea28ff346755b40ecd5acec1da20d76d
Content MD5sum
dd803b852d0320b80ae807c0c21879aa
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_7338_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
7338
Read 1
22KFF5LT3
7.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
7338
Read 2, Barcode index
22KFF5LT3
11 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)

Files Derived From This File

2 items
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
20 GB
validated
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
1.4 GB
validated