Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI8153CPRN
IGVFFI8153CPRN
released
validated
Json view
File Set
IGVFDS6909NSFT
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI4704XUQF, IGVFFI5683TTVW
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_7338_seqspec
md5sum
ea28ff346755b40ecd5acec1da20d76d
Content MD5sum
dd803b852d0320b80ae807c0c21879aa
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_7338_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI4704XUQF
fastq
reads
7338
Read 1
Illumina NovaSeq 6000
22KFF5LT3
7.7 GB
Jason Buenrostro, Broad
validated
IGVFFI5683TTVW
fastq
reads
7338
Read 2, Barcode index
Illumina NovaSeq 6000
22KFF5LT3
11 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9503WHHQ
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)