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INDEXED
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ConfigurationFile
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IGVFFI8107PXNT
IGVFFI8107PXNT
released
validated
Json view
File Set
IGVFDS6783BLZB
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI0248YHIB, IGVFFI8130CJWK
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8344_seqspec
md5sum
efaef157b2547ce6daf35a51331e9e36
Content MD5sum
cf9e726fd558e1211a3f0f5b73baff08
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8344_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0248YHIB
fastq
reads
8344
Read 1
Illumina NovaSeq X
22V3MJLT3
2.3 GB
Jason Buenrostro, Broad
validated
IGVFFI8130CJWK
fastq
reads
8344
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
3.2 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4295RKOR
Tissue
left cerebral cortex
Mus musculus C57BL/6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 533)