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INDEXED
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ConfigurationFile
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IGVFFI8080HBHK
IGVFFI8080HBHK
released
validated
Json view
File Set
IGVFDS2449MQOK
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI4338OVYC, IGVFFI4790OIUA
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8405_seqspec
md5sum
b487b6bc325282eee7138657ef0e5f8c
Content MD5sum
12f0678e1e889ab1221b9300b6cb3e4d
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8405_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI4338OVYC
fastq
reads
8405
Read 1
Illumina NovaSeq X
22V3MJLT3
3.8 GB
Jason Buenrostro, Broad
validated
IGVFFI4790OIUA
fastq
reads
8405
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
6.5 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1668LOKY
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 605)