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INDEXED
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ConfigurationFile
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IGVFFI8044WCRU
IGVFFI8044WCRU
released
validated
Json view
File Set
IGVFDS5417MWZF
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI0279UFOQ, IGVFFI2096LEPL
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8278_seqspec
md5sum
948eb33586ab76fc79540ee1cf471fd8
Content MD5sum
6fb1345c683b01c2effe1d43b6ea31fa
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8278_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0279UFOQ
fastq
reads
8278
Read 1
Illumina NovaSeq X
22TMH5LT3
3.0 GB
Jason Buenrostro, Broad
validated
IGVFFI2096LEPL
fastq
reads
8278
Read 2, Barcode index
Illumina NovaSeq X
22TMH5LT3
4.2 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9059OMXR
Tissue
left cerebral cortex
Mus musculus C57BL/6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 532)