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IGVFFI7983WCRU

released
validated
File Set
IGVFDS8225URBF(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI1194WFRQ, IGVFFI1545WPGA
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5367_seqspec
md5sum
8ef75cd8ece5537068fb7a5cca2d09ad
Content MD5sum
7a53844b89a2215155e6e6ee93db106c
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5367_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
5367
Read 1
22KHF5LT3
7.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
5367
Read 2, Barcode index
22KHF5LT3
11 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 435)

Files Derived From This File

2 items
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
20 GB
validated
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
1.4 GB
validated