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INDEXED
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IGVFFI7971ZCIE
IGVFFI7971ZCIE
released
validated
Json view
File Set
IGVFDS2259DWKL
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI9846ECMS, IGVFFI1915BHZZ, IGVFFI1517VBJH
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI9846ECMS_seqspec
md5sum
62545fbf3d2c85d50cad140bb8c87e2e
Content MD5sum
d20d660c3769a21b1a5bc25734a80786
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI9846ECMS_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1517VBJH
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
5.2 GB
Jason Buenrostro, Broad
validated
IGVFFI1915BHZZ
fastq
reads
1
Read 2
Illumina NovaSeq 6000
10 GB
Jason Buenrostro, Broad
validated
IGVFFI9846ECMS
fastq
reads
1
Read 1
Illumina NovaSeq 6000
9.9 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7625PGWV
InVitroSystem
colon epithelial cell
Homo sapiens colon epithelial cell organoid induced to colon for 7 days