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IGVFFI7954UIUN

released
validation exempted
File Set
IGVFDS8029DSPH(gRNA sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting transcription start sites in 24 genes)
Summary
seqspec of IGVFFI5492CFOS, IGVFFI3480BTJU
File Format
yaml
Content Type
seqspec
Aliases
charles-gersbach:cd8-tcells-perturb-seq-crispri-grna-rep1-rep1-fastq-lane2_seqspec
md5sum
0d7ad92d7d13aa3b28bcfe608a723528
Content MD5sum
7d175022ef2789c0b8f1a7ceacdaca70
File Size
1.1 KB
Submitted File Name
/datacommons/gersbachlab/Ruhi/IGVFseqspec/CRISPRiD1_S1nS7_L002.crispr.yaml.gz
Checkfiles Version
No version due to exemption
Attribution
Charles Gersbach, Duke

seqspec File Of

2 items
Read Names
fastq
reads
1
Read 1
HMCCWDSX3
2
2.5 GB
Charles Gersbach, Duke
validated
fastq
reads
1
Read 2
HMCCWDSX3
2
4.4 GB
Charles Gersbach, Duke
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Homo sapiens CD8-positive, alpha-beta memory T cell modified with CRISPRi Sa-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library (MOI of 0.4)