IGVFFI7954ERXG

released
validation exempted
1{
2    "@context": "/terms/",
3    "@id": "/configuration-files/IGVFFI7954ERXG/",
4    "@type": [
5        "ConfigurationFile",
6        "File",
7        "Item"
8    ],
9    "accession": "IGVFFI7954ERXG",
10    "assay_titles": [],
11    "audit": {},
12    "award": {
13        "@id": "/awards/HG011966/",
14        "component": "functional characterization"
15    },
16    "content_md5sum": "90b5e58682177123f964c9926fd3662f",
17    "content_type": "seqspec",
18    "creation_timestamp": "2024-10-16T07:52:47.969928+00:00",
19    "derived_from": [
20        "/tabular-files/IGVFFI2041KXFD/"
21    ],
22    "description": "Sequence specification of the assignment library",
23    "file_format": "yaml",
24    "file_set": {
25        "@id": "/construct-library-sets/IGVFDS1589ODOW/",
26        "@type": [
27            "ConstructLibrarySet",
28            "FileSet",
29            "Item"
30        ],
31        "accession": "IGVFDS1589ODOW",
32        "file_set_type": "reporter library",
33        "status": "released",
34        "summary": "reporter library targeting candidate cis-regulatory elements genome-wide"
35    },
36    "file_size": 1757,
37    "gene_list_for": [],
38    "href": "/configuration-files/IGVFFI7954ERXG/@@download/IGVFFI7954ERXG.yaml.gz",
39    "input_file_for": [],
40    "integrated_in": [],
41    "lab": {
42        "@id": "/labs/nadav-ahituv/",
43        "title": "Nadav Ahituv, UCSF"
44    },
45    "loci_list_for": [],
46    "md5sum": "5a63267c52dd4b9c4db433e7f559cc3f",
47    "quality_metrics": [],
48    "release_timestamp": "2025-01-30T17:46:54.959850+00:00",
49    "s3_uri": "s3://igvf-files/2024/10/16/68dc0f6e-fbbe-4d84-87dd-f87db1a2d3f1/IGVFFI7954ERXG.yaml.gz",
50    "schema_version": "7",
51    "seqspec_of": [
52        "/sequence-files/IGVFFI7003XVUG/",
53        "/sequence-files/IGVFFI5231ATBS/",
54        "/sequence-files/IGVFFI0921LXBF/",
55        "/sequence-files/IGVFFI8640LLIG/",
56        "/sequence-files/IGVFFI0576IRDC/",
57        "/sequence-files/IGVFFI6354NJGB/",
58        "/sequence-files/IGVFFI4403ENTR/",
59        "/sequence-files/IGVFFI2142OYFW/",
60        "/sequence-files/IGVFFI6807PKQA/"
61    ],
62    "status": "released",
63    "submitted_by": {
64        "@id": "/users/3ad3479d-753b-4293-9c09-c0dcabfd0ddb/",
65        "title": "Max Schubach"
66    },
67    "submitted_file_name": "\"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/proximalPromotor/association/seqspec/IGVF_shendure_proximalPromoter_assignment.yaml.gz\"",
68    "submitter_comment": "\"This file was previously validated by legacy checkfiles and is seqspec v0.3.0. It is now local checkfiles V17 validated, patched to be validation exempted as a part of portal-wide seqspec updating effort.\"",
69    "summary": "seqspec of IGVFFI7003XVUG, IGVFFI5231ATBS, IGVFFI0921LXBF, IGVFFI8640LLIG, IGVFFI0576IRDC, IGVFFI6354NJGB, IGVFFI4403ENTR, IGVFFI2142OYFW, IGVFFI6807PKQA",
70    "upload_status": "validation exempted",
71    "uuid": "68dc0f6e-fbbe-4d84-87dd-f87db1a2d3f1",
72    "validate_onlist_files": false
73}