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INDEXED
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ConfigurationFile
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IGVFFI7872VBWG
IGVFFI7872VBWG
released
validated
Json view
File Set
IGVFDS9209XACN
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI4354ROOZ, IGVFFI1350CWOS, IGVFFI0879NPUS
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI1350CWOS_seqspec
md5sum
a561245042ecefb47e2edab2ab2442db
Content MD5sum
5bbcc22fba997c9d3d15e7b0c253ebd6
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI1350CWOS_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0879NPUS
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
7.2 GB
Jason Buenrostro, Broad
validated
IGVFFI1350CWOS
fastq
reads
1
Read 1
Illumina NovaSeq 6000
20 GB
Jason Buenrostro, Broad
validated
IGVFFI4354ROOZ
fastq
reads
1
Read 2
Illumina NovaSeq 6000
20 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6844DNNZ
Tissue
colon
Mus musculus C57BL/6J colon tissue