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IGVFFI7751PYOZ

released
validated
File Set
IGVFDS3368OEWN(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI2158AGZC, IGVFFI8157LACK
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5359_seqspec
md5sum
091e6f02838b5d8b87e54f451da4ce3b
Content MD5sum
20b98bc71f6c0e4b169be50ae5d6834f
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5359_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
5359
Read 1
22KHF5LT3
7.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
5359
Read 2, Barcode index
22KHF5LT3
11 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 432)

Files Derived From This File

2 items
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
22 GB
validated
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
1.6 GB
validated