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INDEXED
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ConfigurationFile
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IGVFFI7751PYOZ
IGVFFI7751PYOZ
released
validated
Json view
File Set
IGVFDS3368OEWN
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI2158AGZC, IGVFFI8157LACK
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5359_seqspec
md5sum
091e6f02838b5d8b87e54f451da4ce3b
Content MD5sum
20b98bc71f6c0e4b169be50ae5d6834f
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5359_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2158AGZC
fastq
reads
5359
Read 1
Illumina NovaSeq 6000
22KHF5LT3
7.3 GB
Jason Buenrostro, Broad
validated
IGVFFI8157LACK
fastq
reads
5359
Read 2, Barcode index
Illumina NovaSeq 6000
22KHF5LT3
11 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1149LLIF
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 432)