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INDEXED
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ConfigurationFile
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IGVFFI7727XQJW
IGVFFI7727XQJW
released
validated
Json view
File Set
IGVFDS1742BLLN
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI3271SBSH, IGVFFI5142TSAZ, IGVFFI5099VAJU, IGVFFI4672XWHL
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp9_rna_10x3_NGS3
md5sum
a2d2cf6c9ac7409b742f5911ee8c64a7
Content MD5sum
2430056066ad923f84ec5ed8eea13d61
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp9_rna_10x3_NGS3_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3271SBSH
fastq
reads
1
Illumina NovaSeq X
223JHYLT3
3
2.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI4672XWHL
fastq
reads
1
Illumina NovaSeq X
223JHYLT3
3
2.1 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5099VAJU
fastq
reads
1
Read 2
Illumina NovaSeq X
223JHYLT3
3
19 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5142TSAZ
fastq
reads
1
Read 1
Illumina NovaSeq X
223JHYLT3
3
8.8 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM2794HHHZ
MultiplexedSample
B cell
multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 1 day; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 5 days; ... and 5 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford