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INDEXED
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ConfigurationFile
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IGVFFI7669KDDW
IGVFFI7669KDDW
released
validated
Json view
File Set
IGVFDS4752BWME
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI3417NQWN, IGVFFI5346KGGA
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5383_seqspec
md5sum
0ee1a918a59abdd844d5f1763dcab113
Content MD5sum
e84ef85f8fe5efe096f7be2e2506152a
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5383_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3417NQWN
fastq
reads
5383
Read 1
Illumina NovaSeq 6000
22KHF5LT3
7.2 GB
Jason Buenrostro, Broad
validated
IGVFFI5346KGGA
fastq
reads
5383
Read 2, Barcode index
Illumina NovaSeq 6000
22KHF5LT3
12 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)