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IGVFFI7669KDDW

released
validated
File Set
IGVFDS4752BWME(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI3417NQWN, IGVFFI5346KGGA
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5383_seqspec
md5sum
0ee1a918a59abdd844d5f1763dcab113
Content MD5sum
e84ef85f8fe5efe096f7be2e2506152a
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5383_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
5383
Read 1
22KHF5LT3
7.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
5383
Read 2, Barcode index
22KHF5LT3
12 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)

Files Derived From This File

2 items
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
6.8 GB
validated
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
1.2 GB
validated