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INDEXED
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IGVFFI7662LOEW
IGVFFI7662LOEW
released
validated
Json view
File Set
IGVFDS8924NQYH
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI8211KXNO, IGVFFI0012QEYP, IGVFFI1820SQGG, IGVFFI5679PEKY
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp12_rna_10x7_NGS6
md5sum
f1c2f5f3047bbb8f3f19da7de52e4bbd
Content MD5sum
05d1d190c472cb1298f3aa78d5bccafa
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp12_rna_10x7_NGS6_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0012QEYP
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
6
966 MB
Ansuman Satpathy, Stanford
validated
IGVFFI1820SQGG
fastq
reads
1
Read 1
Illumina NovaSeq X
225LWLLT3
6
3.5 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5679PEKY
fastq
reads
1
Read 2
Illumina NovaSeq X
225LWLLT3
6
7.5 GB
Ansuman Satpathy, Stanford
validated
IGVFFI8211KXNO
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
6
916 MB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM6125HAMH
MultiplexedSample
B cell
,
bone marrow
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford