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INDEXED
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ConfigurationFile
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IGVFFI7549SZFK
IGVFFI7549SZFK
released
validated
Json view
File Set
IGVFDS6909NSFT
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI1056SNKD, IGVFFI2741WDZJ
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_7333_seqspec
md5sum
a07d65982a0b6b4e2528a0042b926f54
Content MD5sum
5f2fb4910dac144b7f9ad26c0ec3b772
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_7333_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1056SNKD
fastq
reads
7333
Read 1
Illumina NovaSeq 6000
22KFF5LT3
7.7 GB
Jason Buenrostro, Broad
validated
IGVFFI2741WDZJ
fastq
reads
7333
Read 2, Barcode index
Illumina NovaSeq 6000
22KFF5LT3
11 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9503WHHQ
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)