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IGVFFI7549KDGC

released
validated
File Set
IGVFDS9384BVGM(scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)
Summary
seqspec of IGVFFI4869ZGAF, IGVFFI7836XPXO, IGVFFI6587BAHX, IGVFFI1954VLUX
File Format
yaml
Content Type
seqspec
Aliases
jay-shendure:CRISPRa_singlecell_iPSC-derived-neurons_VPH_10Xlane1_seqlane2_exprs_seqspec
md5sum
dc0aae8449cf88922b9b93f3a2c669b2
Content MD5sum
aef92bb1e8bf15f138da6a2b1ba281b7
File Size
1.4 KB
Submitted File Name
/net/shendure/vol1/home/martin91/IGVF/forupload/seqspecs/CRISPRa/CRISPRa_IGVFDS9384BVGM_2_exprs_seqspec_v3.yaml.gz
Checkfiles Version
v20
Attribution
Jay Shendure, UW

seqspec File Of

4 items
Read Names
fastq
reads
1
Read 2
AAAMCTVHV
2
4.8 GB
Jay Shendure, UW
validated
fastq
reads
1
AAAMCTVHV
2
610 MB
Jay Shendure, UW
validated
fastq
reads
1
Read 1
AAAMCTVHV
2
2.2 GB
Jay Shendure, UW
validated
fastq
reads
1
AAAMCTVHV
2
694 MB
Jay Shendure, UW
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days (cellular sub pool: 10Xlane1) modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library