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IGVFFI7477WWFV

released
validated
File Set
IGVFDS0272VVTX(scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)
Summary
seqspec of IGVFFI2130NYWI, IGVFFI5160NESU, IGVFFI4890DZGD, IGVFFI6684VWOI
File Format
yaml
Content Type
seqspec
Aliases
jay-shendure:CRISPRa_singlecell_iPSC-derived-neurons_VPH_10Xlane2_seqlane2_exprs_seqspec
md5sum
1644e0005bf9c0ab3ba94a42b6ad4d1f
Content MD5sum
669002e9fc12c81d226dd8bd32a629e1
File Size
1.4 KB
Submitted File Name
/net/shendure/vol1/home/martin91/IGVF/forupload/seqspecs/CRISPRa/CRISPRa_IGVFDS0272VVTX_2_exprs_seqspec_v3.yaml.gz
Checkfiles Version
v20
Attribution
Jay Shendure, UW

seqspec File Of

4 items
Read Names
fastq
reads
1
AAAMCTVHV
2
559 MB
Jay Shendure, UW
validated
fastq
reads
1
Read 1
AAAMCTVHV
2
2.0 GB
Jay Shendure, UW
validated
fastq
reads
1
AAAMCTVHV
2
616 MB
Jay Shendure, UW
validated
fastq
reads
1
Read 2
AAAMCTVHV
2
4.6 GB
Jay Shendure, UW
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days (cellular sub pool: 10Xlane2) modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library