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INDEXED
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ConfigurationFile
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IGVFFI7469SOJW
IGVFFI7469SOJW
released
validated
Json view
File Set
IGVFDS8398CKNT
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI0500KQFG, IGVFFI1429UDGT, IGVFFI5562QBAP, IGVFFI5686HDAC
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp13_rna_10x2_NGS2
md5sum
6ea106d25f2cd8e56ed4a9924a1ccceb
Content MD5sum
596788003495d9170de8e7fc8a8e4bb8
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp13_rna_10x2_NGS2_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0500KQFG
fastq
reads
1
Read 1
Illumina NovaSeq X
22HHHWLT3
2
6.6 GB
Ansuman Satpathy, Stanford
validated
IGVFFI1429UDGT
fastq
reads
1
Illumina NovaSeq X
22HHHWLT3
2
1.7 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5562QBAP
fastq
reads
1
Illumina NovaSeq X
22HHHWLT3
2
1.9 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5686HDAC
fastq
reads
1
Read 2
Illumina NovaSeq X
22HHHWLT3
2
15 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM7106DAZZ
MultiplexedSample
left coronary artery
coronary artery disorder
multiplexed sample: Homo sapiens (female, 48 years) left coronary artery tissue associated with coronary artery disorder; Homo sapiens (female, 73 years) left coronary artery tissue associated with coronary artery disorder; ... and 2 more samples