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IGVFFI7442LQET

released
validated
File Set
IGVFDS7571FXYP(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI6977ITAT, IGVFFI2496FAKM
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_3833_seqspec
md5sum
a406893965cd44d803cd520900a801e7
Content MD5sum
49d9e4f5cd08415a49911462ba9c6ea1
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_3833_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
3833
Read 2, Barcode index
H22KKDRX5
1.5 GB
Jason Buenrostro, Broad
validated
fastq
reads
3833
Read 1
H22KKDRX5
932 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)

Files Derived From This File

2 items
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
6.8 GB
validated
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
1.2 GB
validated