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INDEXED
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ConfigurationFile
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IGVFFI7422YTYA
IGVFFI7422YTYA
released
validated
Json view
File Set
IGVFDS6943MGVC
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI6001CIBT, IGVFFI3153SRRQ, IGVFFI0985MPWL, IGVFFI2470GRMJ
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp11_rna_10x4_NGS2
md5sum
0470cea5fe08d2c97810c7fa9a144e20
Content MD5sum
3ed8de82f504df4e2f9fde86b2a117ad
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp11_rna_10x4_NGS2_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0985MPWL
fastq
reads
1
Read 1
Illumina NovaSeq X
HGVFMDSX7
4
37 GB
Ansuman Satpathy, Stanford
validated
IGVFFI2470GRMJ
fastq
reads
1
Read 2
Illumina NovaSeq X
HGVFMDSX7
4
32 GB
Ansuman Satpathy, Stanford
validated
IGVFFI3153SRRQ
fastq
reads
1
Illumina NovaSeq X
HGVFMDSX7
4
3.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6001CIBT
fastq
reads
1
Illumina NovaSeq X
HGVFMDSX7
4
3.1 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8200CKYL
MultiplexedSample
GM25256 (WTC-11)
,
H7-hESC
multiplexed sample: H7-hESC differentiated cell specimen, female, Homo sapiens; GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 6 days, male, Homo sapiens; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford