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INDEXED
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IGVFFI7307TRXS
IGVFFI7307TRXS
released
validated
Json view
File Set
IGVFDS1681DUIN
(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI3923LTFP, IGVFFI8899OCMF, IGVFFI3017ZKLK, IGVFFI9872ZCYZ
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp13_atac_10x1_NGS1
md5sum
c07bb5d1fe401dbff01bb658d2520e67
Content MD5sum
2c88947d94671f4bcf9b36672110ecea
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp13_atac_10x1_NGS1_atac_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3017ZKLK
fastq
reads
1
Illumina NovaSeq X
22JL3GLT3
1
2.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI3923LTFP
fastq
reads
1
Barcode index
Illumina NovaSeq X
22JL3GLT3
1
5.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI8899OCMF
fastq
reads
1
Read 1
Illumina NovaSeq X
22JL3GLT3
1
9.2 GB
Ansuman Satpathy, Stanford
validated
IGVFFI9872ZCYZ
fastq
reads
1
Read 2
Illumina NovaSeq X
22JL3GLT3
1
9.0 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM6422YWWA
MultiplexedSample
left coronary artery
coronary artery disorder
multiplexed sample: Homo sapiens (female, 48 years) left coronary artery tissue associated with coronary artery disorder; Homo sapiens (female, 73 years) left coronary artery tissue associated with coronary artery disorder; ... and 2 more samples