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INDEXED
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ConfigurationFile
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IGVFFI7160GJNZ
IGVFFI7160GJNZ
released
validated
Json view
File Set
IGVFDS4886GWPA
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI6399EKWI, IGVFFI4017LTEF
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8303_seqspec
md5sum
5bf5685e8654278be355b45e0c0796f1
Content MD5sum
ac8bd47a6569e312cbab239929203839
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8303_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI4017LTEF
fastq
reads
8303
Read 2, Barcode index
Illumina NovaSeq X
22TMH5LT3
8.8 GB
Jason Buenrostro, Broad
validated
IGVFFI6399EKWI
fastq
reads
8303
Read 1
Illumina NovaSeq X
22TMH5LT3
4.8 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1072XOVT
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 533)