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INDEXED
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ConfigurationFile
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IGVFFI7112FBEP
IGVFFI7112FBEP
released
validated
Json view
File Set
IGVFDS3861CXLU
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI5103LWRW, IGVFFI2541TDKG, IGVFFI1885ZBYE
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI5103LWRW_seqspec
md5sum
bba56e35458ff40fc10146ce30b3350e
Content MD5sum
e7e071eaef784beb64c2774834378e99
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI5103LWRW_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1885ZBYE
fastq
reads
2
Barcode index
Illumina NovaSeq 6000
1.6 GB
Jason Buenrostro, Broad
validated
IGVFFI2541TDKG
fastq
reads
2
Read 2
Illumina NovaSeq 6000
3.2 GB
Jason Buenrostro, Broad
validated
IGVFFI5103LWRW
fastq
reads
2
Read 1
Illumina NovaSeq 6000
3.1 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0354RWOF
PrimaryCell
colon
Mus musculus C57BL/6J colon cell